FOLD: exploring the protein sequence-structure relations

 M. Mezei  
 
Ref: M. Mezei, On predicting foldability of a protein from its sequence, Proteins, 88, 355-365 (2020).  DOI: 10.1002/prot.25811  
Ref: M. Mezei, Exploiting Sparse Statistics for a Sequence-Based Prediction of the Effect of Mutations, Algorithms, 12, 214 (2019). DOI: 10.3390/a12100214  
Ref: M. Mezei, Foldability and chameleon propensity of fold-switching protein sequences, Proteins, , accepted (2020).  DOI: 10.1002/prot.25989  
 
Last updated: 08/01/2020
Licensing/Downloading Information Full documentation Download distribution
ss_nr50.txt: 50% similarity subset of ss.txt (https://www.rcsb.org/)
ss_new_nr50.txt: 50% similarity subset of the test sequence set from the PDB
runall.bat: list of fold commands to generate the data in the Proteins paper

FOLD reads or generates a set of amino acid sequences and calculates various statistical properties of these sequences and estimates the foldability of input sequences.

List of other programs

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